Contributors¶
EDAM Developers¶
- Jon Ison (DTU, DK) lead developer
- Matúš Kalaš (University of Bergen, NO)
- Hervé Ménager (Institut Pasteur, FR)
- Veit Schwämmle (SDU, DK)
EDAM Editors¶
Official EDAM Editors are now part of the Thematic Editors group serving both EDAM and bio.tools.
EDAM Advisory Group¶
- Alfonso Valencia (ELIXIR ES)
- Anna-Lena Lamprecht (University of Potsdam, DE)
- Cath Brooksbank (ELIXIR EMBL-EBI)
- Christophe Blanchet (ELIXIR FR)
- Hedi Peterson (ELIXIR EE)
- Heinz Stockinger (ELIXIR CH)
- Inge Jonassen (ELIXIR NO)
- Karel Berka (ELIXIR CZ)
- Michael Crusoe
- Søren Brunak (ELIXIR DK)
- Steven Newhouse (ELIXIR EMBL-EBI)
Note
We hope soon to expand the Advisory Group to include representatives of all the projects and groups which are using, or seriously considering using EDAM, including (non-exhaustive list):
| Project | Description | Possible representative |
|---|---|---|
| bio.tools | ELIXIR Tools and Data Services Registry. | Hans-Ioan Lenasescu? |
| Bioschema | Fosters the use of schema.org within the life sciences. | Alasdair Gray?, Giuseppe Profiti? |
| BISE | Bioimage Informatics Search Engine (uses EDAM-Bioimaging). | Perrine Paul-Gilloteaux? |
| CWL / CWLProv |
|
Michael Crusoe |
| Debian Med | Debian flavour well fit for medical practice and biomedical research. | Steffen Möller? |
| DSEO | Data Science Education Ontology | Lily Fierro |
| EMBL EBI (tools) | Tools and data resources from EMBL-EBI | Jonathon Hickford? Rodrigo Lopez? |
| EMBL EBI (training) | Training resources from EMBL-EBI | Laura Emery? |
| Galaxy | Open source, web-based platform for data intensive biomedical research. | Björn Gruening? John Chilton? |
| H3Africa eGenomics Catalogue | Consortium to empower African researchers in genomic sciences. | tbd |
| Identifiers.org | Resolving system for referencing of data for the scientific community. | Sarala Wimalaratne? |
| IFB RAINBIO Bioinformatics Cloud Appliances | Bioinformatics cloud appliances registry from the IFB. | Christophe Blanchet |
| IFB catalogue | Bioinformatics resource catalogue from the IFB. | Jacques Van Helden, Hervé Menager |
| PROPHETS workflow synthesis | Workflow synthesis using EDAM. | Anna-Lena Lamprecht |
| TeSS | ELIXIR’s training portal; browse and discover life sciences training resources. | Niall Beard? |
| The flora phenotype ontology (FLOPO) | Robert Hoehndorf | |
| Pathogen-Host Interaction Database (PHI-base) | Robert Hoehndorf | |
| Subject Resource Application Ontology | Allyson Lister | |
| Software ontology | Allyson Lister | |
| BIOLITMAP | Bazaga, A | |
| APE | Anna-Lena Lamprecht |
Contributors¶
Thanks to the many people who have contributed - if you’re not listed below, please let us know!
- Marie Grosjean (IFB, FR)
- Nathalie Conte (EMBL-EBI, UK)
- Victor de la Torre (ELIXIR-ES)
- Ray Fergerson (Stanford University, USA)
- Carole Goble (ELIXIR-UK)
- Simon Jupp (EMBL-EBI, UK)
- Peter Løngreen (CBS-DTU, DK)
- Allyson Lister (Newcastle University, UK)
- Rodrigo Lopez (EMBL-EBI, UK)
- James Malone (EMBL-EBI, UK)
- Julie McMurry (EMBL-EBI, UK)
- Hamish McWilliam (formerly EMBL-EBI, UK)
- Helen Parkinson (EMBL-EBI, UK)
- Steve Pettifer (University of Manchester, UK)
- Kristoffer Rapacki (CBS-DTU, DK)
- Peter Rice (Imperial College, UK)
- Mahmut Uludag (EMBL-EBI, UK)
- Jiří Vondrášek (IOCB AS, CZ)
- Gert Vriend (CMBI, NL)
- Trish Whetzel (University of California, USA)
- David Sehnal (MU, CZ)
- Dmitry Repchevsky (BSC, ES)
- Ivan Mičetić (University of Padova, IT)
- Kristian Davidsen (DTU, DK)
- Laura Emery (EMBL-EBI, UK)
- Lukáš Pravda (MU, CZ)
- Stanislav Geidl (MU, CZ)
- Wouter Touw (CMBI, NL)